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The table below summarizes RasMol's classification of the natural amino acids in predefined atom sets:
|
Residues: |
ala |
arg |
asn |
asp |
cys |
glu |
gln |
gly |
his |
ile |
leu |
lys |
met |
phe |
pro |
ser |
thr |
trp |
tyr |
val |
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Atom Set |
A |
R |
N |
D |
C |
E |
Q |
G |
H |
I |
L |
K |
M |
F |
P |
S |
T |
W |
Y |
V |
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|
acidic |
|
|
|
* |
|
* |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
||||||
|
acyclic |
* |
* |
* |
* |
* |
* |
* |
* |
|
* |
* |
* |
* |
|
|
* |
* |
|
|
* |
||||||
|
aliphatic |
* |
|
|
|
|
|
|
|
|
* |
* |
|
|
|
|
|
|
|
|
* |
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|
aromatic |
|
|
|
|
|
|
|
|
* |
|
|
|
|
* |
|
|
|
* |
* |
|
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|
basic |
|
* |
|
|
|
|
|
|
* |
|
|
* |
|
|
|
|
|
|
|
|
||||||
|
buried |
* |
|
|
|
* |
|
|
|
|
* |
* |
|
* |
* |
|
|
|
* |
|
* |
||||||
|
charged |
|
* |
|
* |
|
* |
|
|
* |
|
|
* |
|
|
|
|
|
|
|
|
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|
cyclic |
|
|
|
|
|
|
|
|
* |
|
|
|
|
* |
* |
|
|
* |
* |
|
||||||
|
hydrophobic |
* |
|
|
|
|
|
|
* |
|
* |
* |
|
* |
* |
* |
|
|
* |
* |
* |
||||||
|
large |
|
* |
|
|
|
* |
* |
|
* |
* |
* |
* |
* |
* |
|
|
|
* |
* |
|
||||||
|
medium |
|
|
* |
* |
* |
|
|
|
|
|
|
|
|
|
* |
|
* |
|
|
* |
||||||
|
negative |
|
|
|
* |
|
* |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
||||||
|
neutral |
* |
|
* |
|
* |
|
* |
* |
* |
* |
* |
|
* |
* |
* |
* |
* |
* |
* |
* |
||||||
|
polar |
|
* |
* |
* |
* |
* |
* |
|
* |
|
|
* |
|
|
|
* |
* |
|
|
|
||||||
|
positive |
|
* |
|
|
|
|
|
|
* |
|
|
* |
|
|
|
|
|
|
|
|
||||||
|
small |
* |
|
|
|
|
|
|
* |
|
|
|
|
|
|
|
* |
|
|
|
|
||||||
|
surface |
|
* |
* |
* |
|
* |
* |
* |
* |
|
|
* |
|
|
* |
* |
* |
|
* |
|
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